Profile HMM methods for sensitive database searches
Basically, you give HMMER a multiple sequence alignment as input; it builds a statistical model called a "hidden Markov model" which you can then use as a query into a sequence database to find additional homologues of the sequence family.
|Operating System||Architecture||Package Type||Package Size||Date Archived||View Contents?||Download|
|32-bit PA-RISC 1.1||Gzipped|
|783 K||8 Dec 1999||Yes||HTTP FTP|
|1.82 MB||8 Dec 1999||Yes||HTTP FTP|