Profile HMM methods for sensitive database searches

Basically, you give HMMER a multiple sequence alignment as input; it builds a statistical model called a "hidden Markov model" which you can then use as a query into a sequence database to find additional homologues of the sequence family.


Operating System Architecture Package Type Package Size Date Archived View Contents? Download
HP-UX 11.00
32-bit PA-RISC 1.1Gzipped
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783 K8 Dec 1999YesHTTP FTP
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1.82 MB8 Dec 1999YesHTTP FTP