hmmer-2.1.2

Profile HMM methods for sensitive database searches

Basically, you give HMMER a multiple sequence alignment as input; it builds a statistical model called a "hidden Markov model" which you can then use as a query into a sequence database to find additional homologues of the sequence family.

 

Operating System Architecture Package Type Package Size Date Archived View Contents? Download
HP-UX 11.00
 Deprecated 
32-bit PA-RISC 1.1Gzipped
Binary Depot
783 K8 Dec 1999YesHTTP FTP
HP-UX -Tarred/Gzipped
Source Code
1.82 MB8 Dec 1999YesHTTP FTP